WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:T24H7.5d Sequence Name  T24H7.5d
Length (nt)  4630   Chromosome Location  II: 6234587-6244233
Chromosome . Primary Identifier  II Chromosome Location . Start  6234587
Chromosome Location . End  6244233 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24H7.5d

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020784 tat-4 T24H7.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T24H7.5d 6234587 6244233 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52553   123   II: 6234587-6234709 Caenorhabditis elegans
Exon52556   102   II: 6234763-6234864 Caenorhabditis elegans
Exon52559   503   II: 6235003-6235505 Caenorhabditis elegans
Exon52561   121   II: 6236564-6236684 Caenorhabditis elegans
Exon52564   197   II: 6236743-6236939 Caenorhabditis elegans
Exon52568   293   II: 6236986-6237278 Caenorhabditis elegans
Exon52572   282   II: 6237328-6237609 Caenorhabditis elegans
Exon52576   301   II: 6237659-6237959 Caenorhabditis elegans
Exon52580   126   II: 6238145-6238270 Caenorhabditis elegans
Exon52584   245   II: 6238314-6238558 Caenorhabditis elegans
Exon52588   151   II: 6238612-6238762 Caenorhabditis elegans
Exon52592   294   II: 6238809-6239102 Caenorhabditis elegans
Exon52596   225   II: 6239150-6239374 Caenorhabditis elegans
Exon52600   443   II: 6241298-6241740 Caenorhabditis elegans
Exon52604   180   II: 6241796-6241975 Caenorhabditis elegans
Exon52610   97   II: 6242529-6242625 Caenorhabditis elegans
Exon52614   169   II: 6242668-6242836 Caenorhabditis elegans
Exon52618   103   II: 6243033-6243135 Caenorhabditis elegans
Exon52622   556   II: 6243183-6243738 Caenorhabditis elegans
Exon52624   119   II: 6244115-6244233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T24H7.5d 6234587 6244233 -1

1 Sequence

Length
4630

1 Sequence Ontology Term

Identifier Name Description
transcript