WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.5b.1 Sequence Name  F13H8.5b.1
Length (nt)  1914   Chromosome Location  II: 6252719-6256124
Chromosome . Primary Identifier  II Chromosome Location . Start  6252719
Chromosome Location . End  6256124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017438 F13H8.5 F13H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.5b F13H8.5b 1542   II: 6252993-6253085

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.5b.1 6252719 6256124 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52644   367   II: 6252719-6253085 Caenorhabditis elegans
Exon52647   276   II: 6253127-6253402 Caenorhabditis elegans
Exon52649   89   II: 6253448-6253536 Caenorhabditis elegans
Exon52651   106   II: 6253612-6253717 Caenorhabditis elegans
Exon52653   129   II: 6254118-6254246 Caenorhabditis elegans
Exon52654   81   II: 6254378-6254458 Caenorhabditis elegans
Exon52655   78   II: 6254515-6254592 Caenorhabditis elegans
Exon52656   63   II: 6254664-6254726 Caenorhabditis elegans
Exon52658   581   II: 6254994-6255574 Caenorhabditis elegans
Exon52660   144   II: 6255981-6256124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.5b.1 6252719 6256124 -1

1 Sequence

Length
1914

1 Sequence Ontology Term

Identifier Name Description
transcript