WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.2.1 Sequence Name  F13H8.2.1
Length (nt)  3078   Chromosome Location  II: 6270364-6274007
Chromosome . Primary Identifier  II Chromosome Location . Start  6270364
Chromosome Location . End  6274007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017435 F13H8.2 F13H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.2 F13H8.2 2790   II: 6270372-6270527

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.2.1 6270364 6274007 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52700   164   II: 6270364-6270527 Caenorhabditis elegans
Exon52701   121   II: 6270571-6270691 Caenorhabditis elegans
Exon52702   211   II: 6270737-6270947 Caenorhabditis elegans
Exon52703   274   II: 6270996-6271269 Caenorhabditis elegans
Exon52704   200   II: 6271314-6271513 Caenorhabditis elegans
Exon52705   451   II: 6271559-6272009 Caenorhabditis elegans
Exon52706   645   II: 6272056-6272700 Caenorhabditis elegans
Exon52707   482   II: 6272753-6273234 Caenorhabditis elegans
Exon52708   245   II: 6273281-6273525 Caenorhabditis elegans
Exon52709   285   II: 6273723-6274007 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.2.1 6270364 6274007 1

1 Sequence

Length
3078

1 Sequence Ontology Term

Identifier Name Description
transcript