WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.10a.1 Sequence Name  F13H8.10a.1
Length (nt)  3744   Chromosome Location  II: 6274216-6279699
Chromosome . Primary Identifier  II Chromosome Location . Start  6274216
Chromosome Location . End  6279699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.10a F13H8.10a 3648   II: 6274265-6274306

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10a.1 6274216 6279699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52712   91   II: 6274216-6274306 Caenorhabditis elegans
Exon52714   101   II: 6274629-6274729 Caenorhabditis elegans
Exon52715   130   II: 6274775-6274904 Caenorhabditis elegans
Exon52717   147   II: 6274950-6275096 Caenorhabditis elegans
Exon52719   148   II: 6275186-6275333 Caenorhabditis elegans
Exon52722   226   II: 6275378-6275603 Caenorhabditis elegans
Exon52725   204   II: 6275968-6276171 Caenorhabditis elegans
Exon52728   300   II: 6276218-6276517 Caenorhabditis elegans
Exon52732   260   II: 6276567-6276826 Caenorhabditis elegans
Exon52736   179   II: 6276873-6277051 Caenorhabditis elegans
Exon52741   67   II: 6277140-6277206 Caenorhabditis elegans
Exon52746   81   II: 6277341-6277421 Caenorhabditis elegans
Exon52752   248   II: 6277604-6277851 Caenorhabditis elegans
Exon52760   337   II: 6277906-6278242 Caenorhabditis elegans
Exon52768   93   II: 6278288-6278380 Caenorhabditis elegans
Exon52776   373   II: 6278428-6278800 Caenorhabditis elegans
Exon52784   467   II: 6278849-6279315 Caenorhabditis elegans
Exon52792   73   II: 6279362-6279434 Caenorhabditis elegans
Exon52804   219   II: 6279481-6279699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10a.1 6274216 6279699 1

1 Sequence

Length
3744

1 Sequence Ontology Term

Identifier Name Description
transcript