WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.10c.3 Sequence Name  F13H8.10c.3
Length (nt)  3654   Chromosome Location  II: 6274627-6279698
Chromosome . Primary Identifier  II Chromosome Location . Start  6274627
Chromosome Location . End  6279698 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.10c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.10c F13H8.10c 1677   II: 6277690-6277851

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10c.3 6274627 6279698 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52713   103   II: 6274627-6274729 Caenorhabditis elegans
Exon52716   130   II: 6274775-6274904 Caenorhabditis elegans
Exon52718   147   II: 6274950-6275096 Caenorhabditis elegans
Exon52720   148   II: 6275186-6275333 Caenorhabditis elegans
Exon52723   226   II: 6275378-6275603 Caenorhabditis elegans
Exon52726   204   II: 6275968-6276171 Caenorhabditis elegans
Exon52729   300   II: 6276218-6276517 Caenorhabditis elegans
Exon52733   260   II: 6276567-6276826 Caenorhabditis elegans
Exon52737   179   II: 6276873-6277051 Caenorhabditis elegans
Exon52742   67   II: 6277140-6277206 Caenorhabditis elegans
Exon52747   81   II: 6277341-6277421 Caenorhabditis elegans
Exon52755   248   II: 6277604-6277851 Caenorhabditis elegans
Exon52764   337   II: 6277906-6278242 Caenorhabditis elegans
Exon52772   93   II: 6278288-6278380 Caenorhabditis elegans
Exon52780   373   II: 6278428-6278800 Caenorhabditis elegans
Exon52788   467   II: 6278849-6279315 Caenorhabditis elegans
Exon52796   73   II: 6279362-6279434 Caenorhabditis elegans
Exon52803   218   II: 6279481-6279698 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10c.3 6274627 6279698 1

1 Sequence

Length
3654

1 Sequence Ontology Term

Identifier Name Description
transcript