WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.10c.4 Sequence Name  F13H8.10c.4
Length (nt)  3081   Chromosome Location  II: 6275377-6279652
Chromosome . Primary Identifier  II Chromosome Location . Start  6275377
Chromosome Location . End  6279652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.10c.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.10c F13H8.10c 1677   II: 6277690-6277851

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10c.4 6275377 6279652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52721   227   II: 6275377-6275603 Caenorhabditis elegans
Exon52727   204   II: 6275968-6276171 Caenorhabditis elegans
Exon52730   300   II: 6276218-6276517 Caenorhabditis elegans
Exon52734   260   II: 6276567-6276826 Caenorhabditis elegans
Exon52738   179   II: 6276873-6277051 Caenorhabditis elegans
Exon52743   67   II: 6277140-6277206 Caenorhabditis elegans
Exon52748   81   II: 6277341-6277421 Caenorhabditis elegans
Exon52756   248   II: 6277604-6277851 Caenorhabditis elegans
Exon52765   337   II: 6277906-6278242 Caenorhabditis elegans
Exon52773   93   II: 6278288-6278380 Caenorhabditis elegans
Exon52781   373   II: 6278428-6278800 Caenorhabditis elegans
Exon52789   467   II: 6278849-6279315 Caenorhabditis elegans
Exon52797   73   II: 6279362-6279434 Caenorhabditis elegans
Exon52801   172   II: 6279481-6279652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10c.4 6275377 6279652 1

1 Sequence

Length
3081

1 Sequence Ontology Term

Identifier Name Description
transcript