WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.10c.5 Sequence Name  F13H8.10c.5
Length (nt)  2856   Chromosome Location  II: 6275966-6279652
Chromosome . Primary Identifier  II Chromosome Location . Start  6275966
Chromosome Location . End  6279652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.10c.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.10c F13H8.10c 1677   II: 6277690-6277851

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10c.5 6275966 6279652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52724   206   II: 6275966-6276171 Caenorhabditis elegans
Exon52731   300   II: 6276218-6276517 Caenorhabditis elegans
Exon52735   260   II: 6276567-6276826 Caenorhabditis elegans
Exon52739   179   II: 6276873-6277051 Caenorhabditis elegans
Exon52744   67   II: 6277140-6277206 Caenorhabditis elegans
Exon52749   81   II: 6277341-6277421 Caenorhabditis elegans
Exon52757   248   II: 6277604-6277851 Caenorhabditis elegans
Exon52766   337   II: 6277906-6278242 Caenorhabditis elegans
Exon52774   93   II: 6278288-6278380 Caenorhabditis elegans
Exon52782   373   II: 6278428-6278800 Caenorhabditis elegans
Exon52790   467   II: 6278849-6279315 Caenorhabditis elegans
Exon52798   73   II: 6279362-6279434 Caenorhabditis elegans
Exon52802   172   II: 6279481-6279652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10c.5 6275966 6279652 1

1 Sequence

Length
2856

1 Sequence Ontology Term

Identifier Name Description
transcript