WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.10b.1 Sequence Name  F13H8.10b.1
Length (nt)  1958   Chromosome Location  II: 6277274-6279699
Chromosome . Primary Identifier  II Chromosome Location . Start  6277274
Chromosome Location . End  6279699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.10b F13H8.10b 1899   II: 6277286-6277421

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10b.1 6277274 6279699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52745   148   II: 6277274-6277421 Caenorhabditis elegans
Exon52753   248   II: 6277604-6277851 Caenorhabditis elegans
Exon52761   337   II: 6277906-6278242 Caenorhabditis elegans
Exon52769   93   II: 6278288-6278380 Caenorhabditis elegans
Exon52777   373   II: 6278428-6278800 Caenorhabditis elegans
Exon52785   467   II: 6278849-6279315 Caenorhabditis elegans
Exon52793   73   II: 6279362-6279434 Caenorhabditis elegans
Exon52805   219   II: 6279481-6279699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.10b.1 6277274 6279699 1

1 Sequence

Length
1958

1 Sequence Ontology Term

Identifier Name Description
transcript