WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H8.9.1 Sequence Name  F13H8.9.1
Length (nt)  1245   Chromosome Location  II: 6279676-6281102
Chromosome . Primary Identifier  II Chromosome Location . Start  6279676
Chromosome Location . End  6281102 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017442 scly-1 F13H8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H8.9 F13H8.9 1164   II: 6279736-6279925

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.9.1 6279676 6281102 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52808   250   II: 6279676-6279925 Caenorhabditis elegans
Exon52809   113   II: 6279969-6280081 Caenorhabditis elegans
Exon52810   121   II: 6280127-6280247 Caenorhabditis elegans
Exon52811   376   II: 6280295-6280670 Caenorhabditis elegans
Exon52812   385   II: 6280718-6281102 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H8.9.1 6279676 6281102 -1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
transcript