WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25D10.5.1 Sequence Name  T25D10.5.1
Length (nt)  1020   Chromosome Location  II: 6401949-6403105
Chromosome . Primary Identifier  II Chromosome Location . Start  6401949
Chromosome Location . End  6403105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25D10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020802 btb-2 T25D10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25D10.5 T25D10.5 867   II: 6402005-6402099

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25D10.5.1 6401949 6403105 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53083   151   II: 6401949-6402099 Caenorhabditis elegans
Exon53084   343   II: 6402147-6402489 Caenorhabditis elegans
Exon53085   151   II: 6402539-6402689 Caenorhabditis elegans
Exon53086   375   II: 6402731-6403105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25D10.5.1 6401949 6403105 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript