WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T25D10.3b Sequence Name  T25D10.3b
Length (nt)  1155   Chromosome Location  II: 6405440-6405604
Chromosome . Primary Identifier  II Chromosome Location . Start  6405440
Chromosome Location . End  6405604
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25D10.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52732 SPP-11, isoform b 42.2 384 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054128
WBRNAi00019209
WBRNAi00075989

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T25D10.3b 6405440 6405604 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004996 spp-11 T25D10.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T25D10.3b 6405440 6405604 -1
CDS:T25D10.3b 6405649 6405753 -1
CDS:T25D10.3b 6406097 6406147 -1
CDS:T25D10.3b 6406196 6406741 -1
CDS:T25D10.3b 6406788 6406841 -1
CDS:T25D10.3b 6406894 6406944 -1
CDS:T25D10.3b 6407050 6407151 -1
CDS:T25D10.3b 6407262 6407342 -1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T25D10.3b.1 T25D10.3b.1 1228   II: 6405388-6407363