WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K06A1.6c Sequence Name  K06A1.6c
Length (nt)  2961   Chromosome Location  II: 6456857-6456959
Chromosome . Primary Identifier  II Chromosome Location . Start  6456857
Chromosome Location . End  6456959
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A1.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52753 DGK-5, isoform c 110.5 986 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00050019
WBRNAi00016652
WBRNAi00019403

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K06A1.6c 6456857 6456959 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019428 dgk-5 K06A1.6 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:K06A1.6c 6456857 6456959 -1
CDS:K06A1.6c 6457009 6457180 -1
CDS:K06A1.6c 6457361 6457492 -1
CDS:K06A1.6c 6457718 6458051 -1
CDS:K06A1.6c 6458109 6458401 -1
CDS:K06A1.6c 6458461 6458609 -1
CDS:K06A1.6c 6458669 6458826 -1
CDS:K06A1.6c 6458927 6459478 -1
CDS:K06A1.6c 6459680 6459961 -1
CDS:K06A1.6c 6460152 6460257 -1
CDS:K06A1.6c 6465528 6465753 -1
CDS:K06A1.6c 6466414 6466548 -1
CDS:K06A1.6c 6467394 6467520 -1
CDS:K06A1.6c 6470110 6470181 -1
CDS:K06A1.6c 6470366 6470462 -1
CDS:K06A1.6c 6471063 6471085 -1

1 Sequence

Length
2961

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K06A1.6c.1 K06A1.6c.1 3306   II: 6456512-6471085