WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:T28D9.3e Sequence Name  T28D9.3e
Length (nt)  1070   Chromosome Location  II: 6485714-6488750
Chromosome . Primary Identifier  II Chromosome Location . Start  6485714
Chromosome Location . End  6488750 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D9.3e

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020895 plpp-1.2 T28D9.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28D9.3e 6485714 6488750 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53312   78   II: 6485714-6485791 Caenorhabditis elegans
Exon53320   85   II: 6486851-6486935 Caenorhabditis elegans
Exon53327   149   II: 6487556-6487704 Caenorhabditis elegans
Exon53334   118   II: 6487752-6487869 Caenorhabditis elegans
Exon53341   136   II: 6487914-6488049 Caenorhabditis elegans
Exon53342   105   II: 6488098-6488202 Caenorhabditis elegans
Exon53354   180   II: 6488257-6488436 Caenorhabditis elegans
Exon53361   100   II: 6488487-6488586 Caenorhabditis elegans
Exon53363   119   II: 6488632-6488750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28D9.3e 6485714 6488750 1

1 Sequence

Length
1070

1 Sequence Ontology Term

Identifier Name Description
transcript