WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28D9.10a Sequence Name  T28D9.10a
Length (nt)  381   Chromosome Location  II: 6489067-6489161
Chromosome . Primary Identifier  II Chromosome Location . Start  6489067
Chromosome Location . End  6489161
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D9.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02065 SNR-3, isoform a 13.6 126 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00095748
WBRNAi00078041
WBRNAi00054415
WBRNAi00075303
WBRNAi00064878
WBRNAi00075381
WBRNAi00075379
WBRNAi00075380
WBRNAi00075382
WBRNAi00083626
WBRNAi00083728
WBRNAi00083830
WBRNAi00075304
WBRNAi00026425
WBRNAi00036085
WBRNAi00009231
WBRNAi00080022
WBRNAi00106654
WBRNAi00111864
WBRNAi00080110
WBRNAi00064403
WBRNAi00112117
WBRNAi00110910

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28D9.10a 6489067 6489161 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004916 snr-3 T28D9.10 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28D9.10a 6489067 6489161 -1
CDS:T28D9.10a 6489209 6489310 -1
CDS:T28D9.10a 6489356 6489460 -1
CDS:T28D9.10a 6489675 6489753 -1

1 Sequence

Length
381

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28D9.10a.1 T28D9.10a.1 625   II: 6488831-6489761