WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28D9.2b Sequence Name  T28D9.2b
Length (nt)  501   Chromosome Location  II: 6490169-6490356
Chromosome . Primary Identifier  II Chromosome Location . Start  6490169
Chromosome Location . End  6490356
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D9.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36573 RSP-5, isoform b 19.6 166 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00054417
WBRNAi00068301
WBRNAi00019400
WBRNAi00036086
WBRNAi00068300
WBRNAi00068277
WBRNAi00068274
WBRNAi00068282
WBRNAi00068288
WBRNAi00068283
WBRNAi00068284
WBRNAi00068286
WBRNAi00068291
WBRNAi00068299
WBRNAi00068296
WBRNAi00083653
WBRNAi00083752
WBRNAi00083843
WBRNAi00061513
WBRNAi00090574

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28D9.2b 6490169 6490356 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004702 rsp-5 T28D9.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28D9.2b 6490169 6490356 1
CDS:T28D9.2b 6490408 6490659 1
CDS:T28D9.2b 6490720 6490780 1

1 Sequence

Length
501

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28D9.2b.1 T28D9.2b.1 916   II: 6490165-6491340
Transcript:T28D9.2b.2 T28D9.2b.2 1020   II: 6490165-6491340
Transcript:T28D9.2b.3 T28D9.2b.3 1056   II: 6490166-6491332
Transcript:T28D9.2b.4 T28D9.2b.4 950   II: 6490168-6491332