WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05G9.2a.3 Sequence Name  R05G9.2a.3
Length (nt)  2035   Chromosome Location  II: 6492785-6497717
Chromosome . Primary Identifier  II Chromosome Location . Start  6492785
Chromosome Location . End  6497717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05G9.2a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019904 twk-49 R05G9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05G9.2a R05G9.2a 948   II: 6493863-6493978

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05G9.2a.3 6492785 6497717 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53393   1194   II: 6492785-6493978 Caenorhabditis elegans
Exon53401   184   II: 6494036-6494219 Caenorhabditis elegans
Exon53405   102   II: 6494266-6494367 Caenorhabditis elegans
Exon53409   93   II: 6494925-6495017 Caenorhabditis elegans
Exon53413   159   II: 6495071-6495229 Caenorhabditis elegans
Exon53417   94   II: 6497094-6497187 Caenorhabditis elegans
Exon53423   209   II: 6497509-6497717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05G9.2a.3 6492785 6497717 -1

1 Sequence

Length
2035

1 Sequence Ontology Term

Identifier Name Description
transcript