WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05G9.2a.2 Sequence Name  R05G9.2a.2
Length (nt)  2168   Chromosome Location  II: 6492785-6498633
Chromosome . Primary Identifier  II Chromosome Location . Start  6492785
Chromosome Location . End  6498633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05G9.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019904 twk-49 R05G9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05G9.2a R05G9.2a 948   II: 6493863-6493978

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05G9.2a.2 6492785 6498633 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53394   1194   II: 6492785-6493978 Caenorhabditis elegans
Exon53400   184   II: 6494036-6494219 Caenorhabditis elegans
Exon53404   102   II: 6494266-6494367 Caenorhabditis elegans
Exon53408   93   II: 6494925-6495017 Caenorhabditis elegans
Exon53412   159   II: 6495071-6495229 Caenorhabditis elegans
Exon53416   94   II: 6497094-6497187 Caenorhabditis elegans
Exon53421   203   II: 6497509-6497711 Caenorhabditis elegans
Exon53425   139   II: 6498495-6498633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05G9.2a.2 6492785 6498633 -1

1 Sequence

Length
2168

1 Sequence Ontology Term

Identifier Name Description
transcript