WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56E6.3a Sequence Name  C56E6.3a
Length (nt)  1866   Chromosome Location  II: 6517411-6517521
Chromosome . Primary Identifier  II Chromosome Location . Start  6517411
Chromosome Location . End  6517521
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E6.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04275 TOE-2, isoform a 71.2 621 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00043278
WBRNAi00085111
WBRNAi00030205
WBRNAi00022310
WBRNAi00062175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C56E6.3a 6517411 6517521 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016971 toe-2 C56E6.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C56E6.3a 6517411 6517521 -1
CDS:C56E6.3a 6517570 6517699 -1
CDS:C56E6.3a 6517813 6517928 -1
CDS:C56E6.3a 6518008 6518640 -1
CDS:C56E6.3a 6518689 6519064 -1
CDS:C56E6.3a 6519118 6519448 -1
CDS:C56E6.3a 6519493 6519661 -1

1 Sequence

Length
1866

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56E6.3a.2 C56E6.3a.2 2285   II: 6517187-6521375
Transcript:C56E6.3a.1 C56E6.3a.1 2098   II: 6517188-6519670