WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56E6.4a.1 Sequence Name  C56E6.4a.1
Length (nt)  1427   Chromosome Location  II: 6526241-6528729
Chromosome . Primary Identifier  II Chromosome Location . Start  6526241
Chromosome Location . End  6528729 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016972 C56E6.4 C56E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56E6.4a C56E6.4a 1296   II: 6526372-6526546

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56E6.4a.1 6526241 6528729 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53487   306   II: 6526241-6526546 Caenorhabditis elegans
Exon53489   258   II: 6526834-6527091 Caenorhabditis elegans
Exon53491   84   II: 6527180-6527263 Caenorhabditis elegans
Exon53494   133   II: 6527402-6527534 Caenorhabditis elegans
Exon53495   144   II: 6527583-6527726 Caenorhabditis elegans
Exon53497   143   II: 6527771-6527913 Caenorhabditis elegans
Exon53498   81   II: 6527961-6528041 Caenorhabditis elegans
Exon53499   111   II: 6528325-6528435 Caenorhabditis elegans
Exon53500   160   II: 6528513-6528672 Caenorhabditis elegans
Exon53501   7   II: 6528723-6528729 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56E6.4a.1 6526241 6528729 -1

1 Sequence

Length
1427

1 Sequence Ontology Term

Identifier Name Description
transcript