WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F18C5.3 Sequence Name  F18C5.3
Length (nt)  7914   Chromosome Location  II: 6536384-6536458
Chromosome . Primary Identifier  II Chromosome Location . Start  6536384
Chromosome Location . End  6536458
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C5.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53979 UTP-20 300.7 2637 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00043276
WBRNAi00044935
WBRNAi00078357
WBRNAi00013499
WBRNAi00024921
WBRNAi00008562
WBRNAi00110813

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F18C5.3 6536384 6536458 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007050 utp-20 F18C5.3 Caenorhabditis elegans

26 Locations


Feature . Primary Identifier
Start End Strand
CDS:F18C5.3 6536384 6536458 1
CDS:F18C5.3 6536512 6536656 1
CDS:F18C5.3 6536700 6536921 1
CDS:F18C5.3 6536969 6537077 1
CDS:F18C5.3 6537123 6537522 1
CDS:F18C5.3 6537583 6538216 1
CDS:F18C5.3 6538267 6538516 1
CDS:F18C5.3 6538563 6539080 1
CDS:F18C5.3 6539128 6539302 1
CDS:F18C5.3 6539395 6540023 1
CDS:F18C5.3 6540069 6540153 1
CDS:F18C5.3 6546722 6546905 1
CDS:F18C5.3 6547398 6547510 1
CDS:F18C5.3 6547658 6547811 1
CDS:F18C5.3 6547855 6548005 1
CDS:F18C5.3 6549508 6550091 1
CDS:F18C5.3 6550138 6550290 1
CDS:F18C5.3 6550336 6550947 1
CDS:F18C5.3 6550995 6551140 1
CDS:F18C5.3 6551812 6551968 1
CDS:F18C5.3 6552018 6553280 1
CDS:F18C5.3 6553331 6553513 1
CDS:F18C5.3 6553566 6553705 1
CDS:F18C5.3 6553753 6554161 1
CDS:F18C5.3 6554205 6554319 1
CDS:F18C5.3 6554364 6554671 1

1 Sequence

Length
7914

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18C5.3.1 F18C5.3.1 8176   II: 6536374-6554923