WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18C5.5.1 Sequence Name  F18C5.5.1
Length (nt)  803   Chromosome Location  II: 6565477-6566728
Chromosome . Primary Identifier  II Chromosome Location . Start  6565477
Chromosome Location . End  6566728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017560 F18C5.5 F18C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18C5.5 F18C5.5 669   II: 6565544-6565667

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18C5.5.1 6565477 6566728 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53608   191   II: 6565477-6565667 Caenorhabditis elegans
Exon53609   444   II: 6565717-6566160 Caenorhabditis elegans
Exon53610   67   II: 6566202-6566268 Caenorhabditis elegans
Exon53611   101   II: 6566628-6566728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18C5.5.1 6565477 6566728 -1

1 Sequence

Length
803

1 Sequence Ontology Term

Identifier Name Description
transcript