WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18C5.8.1 Sequence Name  F18C5.8.1
Length (nt)  1047   Chromosome Location  II: 6574378-6575747
Chromosome . Primary Identifier  II Chromosome Location . Start  6574378
Chromosome Location . End  6575747 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005055 sra-29 F18C5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18C5.8 F18C5.8 1047   II: 6574378-6574566

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18C5.8.1 6574378 6575747 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53632   189   II: 6574378-6574566 Caenorhabditis elegans
Exon53633   71   II: 6574609-6574679 Caenorhabditis elegans
Exon53634   125   II: 6574739-6574863 Caenorhabditis elegans
Exon53635   425   II: 6574914-6575338 Caenorhabditis elegans
Exon53636   237   II: 6575511-6575747 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18C5.8.1 6574378 6575747 -1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
transcript