WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56C10.12 Sequence Name  C56C10.12
Length (nt)  7062   Chromosome Location  II: 6598564-6598846
Chromosome . Primary Identifier  II Chromosome Location . Start  6598564
Chromosome Location . End  6598846
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56C10.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52956 EPG-5 264.7 2353 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00043261
WBRNAi00043262
WBRNAi00008559
WBRNAi00092364
WBRNAi00092363
WBRNAi00103234
WBRNAi00117882

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C56C10.12 6598564 6598846 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016968 epg-5 C56C10.12 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:C56C10.12 6598564 6598846 -1
CDS:C56C10.12 6598899 6599316 -1
CDS:C56C10.12 6599364 6599519 -1
CDS:C56C10.12 6599568 6599645 -1
CDS:C56C10.12 6599695 6600650 -1
CDS:C56C10.12 6600704 6600954 -1
CDS:C56C10.12 6601000 6601130 -1
CDS:C56C10.12 6603452 6603560 -1
CDS:C56C10.12 6603655 6603741 -1
CDS:C56C10.12 6603790 6604246 -1
CDS:C56C10.12 6604642 6605838 -1
CDS:C56C10.12 6605886 6606610 -1
CDS:C56C10.12 6606654 6606778 -1
CDS:C56C10.12 6606826 6607118 -1
CDS:C56C10.12 6607165 6607241 -1
CDS:C56C10.12 6607291 6607349 -1
CDS:C56C10.12 6607405 6607792 -1
CDS:C56C10.12 6607844 6607977 -1
CDS:C56C10.12 6608028 6608631 -1
CDS:C56C10.12 6608678 6608935 -1
CDS:C56C10.12 6608982 6609081 -1
CDS:C56C10.12 6609131 6609192 -1
CDS:C56C10.12 6609243 6609356 -1

1 Sequence

Length
7062

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56C10.12.1 C56C10.12.1 7291   II: 6598344-6609365