WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54H5.3.1 Sequence Name  F54H5.3.1
Length (nt)  913   Chromosome Location  II: 6622186-6623504
Chromosome . Primary Identifier  II Chromosome Location . Start  6622186
Chromosome Location . End  6623504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54H5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018840 F54H5.3 F54H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54H5.3 F54H5.3 840   II: 6622189-6622269

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54H5.3.1 6622186 6623504 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53790   84   II: 6622186-6622269 Caenorhabditis elegans
Exon53791   65   II: 6622319-6622383 Caenorhabditis elegans
Exon53792   261   II: 6622641-6622901 Caenorhabditis elegans
Exon53793   352   II: 6622944-6623295 Caenorhabditis elegans
Exon53794   151   II: 6623354-6623504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54H5.3.1 6622186 6623504 1

1 Sequence

Length
913

1 Sequence Ontology Term

Identifier Name Description
transcript