WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.6.1 Sequence Name  T19D12.6.1
Length (nt)  2596   Chromosome Location  II: 6637075-6643117
Chromosome . Primary Identifier  II Chromosome Location . Start  6637075
Chromosome Location . End  6643117 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020581 T19D12.6 T19D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.6 T19D12.6 2340   II: 6637314-6637462

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.6.1 6637075 6643117 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53850   388   II: 6637075-6637462 Caenorhabditis elegans
Exon53852   341   II: 6637826-6638166 Caenorhabditis elegans
Exon53853   251   II: 6638214-6638464 Caenorhabditis elegans
Exon53854   229   II: 6638514-6638742 Caenorhabditis elegans
Exon53855   271   II: 6638786-6639056 Caenorhabditis elegans
Exon53857   75   II: 6640074-6640148 Caenorhabditis elegans
Exon53858   168   II: 6640744-6640911 Caenorhabditis elegans
Exon53859   73   II: 6640957-6641029 Caenorhabditis elegans
Exon53860   117   II: 6641118-6641234 Caenorhabditis elegans
Exon53861   157   II: 6641284-6641440 Caenorhabditis elegans
Exon53862   99   II: 6641621-6641719 Caenorhabditis elegans
Exon53863   340   II: 6641766-6642105 Caenorhabditis elegans
Exon53864   87   II: 6643031-6643117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.6.1 6637075 6643117 -1

1 Sequence

Length
2596

1 Sequence Ontology Term

Identifier Name Description
transcript