WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.9.1 Sequence Name  T19D12.9.1
Length (nt)  1498   Chromosome Location  II: 6652338-6654384
Chromosome . Primary Identifier  II Chromosome Location . Start  6652338
Chromosome Location . End  6654384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020583 T19D12.9 T19D12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.9 T19D12.9 1389   II: 6652412-6652675

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.9.1 6652338 6654384 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53881   338   II: 6652338-6652675 Caenorhabditis elegans
Exon53882   93   II: 6652723-6652815 Caenorhabditis elegans
Exon53883   252   II: 6652878-6653129 Caenorhabditis elegans
Exon53884   121   II: 6653177-6653297 Caenorhabditis elegans
Exon53885   149   II: 6653346-6653494 Caenorhabditis elegans
Exon53886   108   II: 6653546-6653653 Caenorhabditis elegans
Exon53887   106   II: 6653701-6653806 Caenorhabditis elegans
Exon53888   109   II: 6653855-6653963 Caenorhabditis elegans
Exon53889   104   II: 6654120-6654223 Caenorhabditis elegans
Exon53890   118   II: 6654267-6654384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.9.1 6652338 6654384 -1

1 Sequence

Length
1498

1 Sequence Ontology Term

Identifier Name Description
transcript