WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.2a.2 Sequence Name  T19D12.2a.2
Length (nt)  2709   Chromosome Location  II: 6661335-6665220
Chromosome . Primary Identifier  II Chromosome Location . Start  6661335
Chromosome Location . End  6665220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020577 T19D12.2 T19D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.2a T19D12.2a 1833   II: 6661996-6662255

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.2a.2 6661335 6665220 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53906   921   II: 6661335-6662255 Caenorhabditis elegans
Exon53912   188   II: 6662303-6662490 Caenorhabditis elegans
Exon53917   206   II: 6662694-6662899 Caenorhabditis elegans
Exon53922   152   II: 6662948-6663099 Caenorhabditis elegans
Exon53927   425   II: 6663145-6663569 Caenorhabditis elegans
Exon53933   107   II: 6664227-6664333 Caenorhabditis elegans
Exon53937   137   II: 6664375-6664511 Caenorhabditis elegans
Exon53941   78   II: 6664558-6664635 Caenorhabditis elegans
Exon53943   69   II: 6664681-6664749 Caenorhabditis elegans
Exon53947   426   II: 6664795-6665220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.2a.2 6661335 6665220 1

1 Sequence

Length
2709

1 Sequence Ontology Term

Identifier Name Description
transcript