WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D12.1a.1 Sequence Name  T19D12.1a.1
Length (nt)  5958   Chromosome Location  II: 6666898-6673752
Chromosome . Primary Identifier  II Chromosome Location . Start  6666898
Chromosome Location . End  6673752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020576 T19D12.1 T19D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D12.1a T19D12.1a 5535   II: 6666920-6667025

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.1a.1 6666898 6673752 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53949   128   II: 6666898-6667025 Caenorhabditis elegans
Exon53952   295   II: 6667075-6667369 Caenorhabditis elegans
Exon53956   137   II: 6667499-6667635 Caenorhabditis elegans
Exon53963   1328   II: 6667679-6669006 Caenorhabditis elegans
Exon53967   206   II: 6669057-6669262 Caenorhabditis elegans
Exon53971   188   II: 6669309-6669496 Caenorhabditis elegans
Exon53975   1072   II: 6669549-6670620 Caenorhabditis elegans
Exon53979   188   II: 6670668-6670855 Caenorhabditis elegans
Exon53983   293   II: 6671060-6671352 Caenorhabditis elegans
Exon53987   152   II: 6671401-6671552 Caenorhabditis elegans
Exon53991   1078   II: 6671598-6672675 Caenorhabditis elegans
Exon53995   137   II: 6672721-6672857 Caenorhabditis elegans
Exon53999   78   II: 6672907-6672984 Caenorhabditis elegans
Exon54003   72   II: 6673028-6673099 Caenorhabditis elegans
Exon54010   606   II: 6673147-6673752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D12.1a.1 6666898 6673752 1

1 Sequence

Length
5958

1 Sequence Ontology Term

Identifier Name Description
transcript