WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H9.3b.1 Sequence Name  C18H9.3b.1
Length (nt)  3117   Chromosome Location  II: 6684249-6691734
Chromosome . Primary Identifier  II Chromosome Location . Start  6684249
Chromosome Location . End  6691734 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016002 gyf-1 C18H9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H9.3b C18H9.3b 3117   II: 6684249-6684304

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H9.3b.1 6684249 6691734 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54057   56   II: 6684249-6684304 Caenorhabditis elegans
Exon54058   106   II: 6684696-6684801 Caenorhabditis elegans
Exon54066   169   II: 6685788-6685956 Caenorhabditis elegans
Exon54070   306   II: 6686030-6686335 Caenorhabditis elegans
Exon54074   681   II: 6686381-6687061 Caenorhabditis elegans
Exon54078   1187   II: 6687108-6688294 Caenorhabditis elegans
Exon54082   273   II: 6688344-6688616 Caenorhabditis elegans
Exon54086   117   II: 6691303-6691419 Caenorhabditis elegans
Exon54091   99   II: 6691466-6691564 Caenorhabditis elegans
Exon54095   123   II: 6691612-6691734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H9.3b.1 6684249 6691734 1

1 Sequence

Length
3117

1 Sequence Ontology Term

Identifier Name Description
transcript