WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H9.5.1 Sequence Name  C18H9.5.1
Length (nt)  1663   Chromosome Location  II: 6692752-6695566
Chromosome . Primary Identifier  II Chromosome Location . Start  6692752
Chromosome Location . End  6695566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016003 C18H9.5 C18H9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H9.5 C18H9.5 1395   II: 6692759-6693082

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H9.5.1 6692752 6695566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54101   331   II: 6692752-6693082 Caenorhabditis elegans
Exon54102   69   II: 6693131-6693199 Caenorhabditis elegans
Exon54103   120   II: 6693246-6693365 Caenorhabditis elegans
Exon54104   63   II: 6693617-6693679 Caenorhabditis elegans
Exon54105   130   II: 6693729-6693858 Caenorhabditis elegans
Exon54106   149   II: 6693903-6694051 Caenorhabditis elegans
Exon54107   214   II: 6694136-6694349 Caenorhabditis elegans
Exon54108   109   II: 6694396-6694504 Caenorhabditis elegans
Exon54109   107   II: 6694553-6694659 Caenorhabditis elegans
Exon54110   77   II: 6695143-6695219 Caenorhabditis elegans
Exon54111   294   II: 6695273-6695566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H9.5.1 6692752 6695566 -1

1 Sequence

Length
1663

1 Sequence Ontology Term

Identifier Name Description
transcript