WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H9.7.1 Sequence Name  C18H9.7.1
Length (nt)  2215   Chromosome Location  II: 6702233-6705643
Chromosome . Primary Identifier  II Chromosome Location . Start  6702233
Chromosome Location . End  6705643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004507 rpy-1 C18H9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H9.7 C18H9.7 1848   II: 6702496-6702600

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H9.7.1 6702233 6705643 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54125   368   II: 6702233-6702600 Caenorhabditis elegans
Exon54126   356   II: 6702704-6703059 Caenorhabditis elegans
Exon54128   131   II: 6703315-6703445 Caenorhabditis elegans
Exon54130   200   II: 6703494-6703693 Caenorhabditis elegans
Exon54132   129   II: 6703743-6703871 Caenorhabditis elegans
Exon54134   66   II: 6704102-6704167 Caenorhabditis elegans
Exon54136   117   II: 6704314-6704430 Caenorhabditis elegans
Exon54138   163   II: 6704483-6704645 Caenorhabditis elegans
Exon54140   148   II: 6704688-6704835 Caenorhabditis elegans
Exon54142   266   II: 6704881-6705146 Caenorhabditis elegans
Exon54144   77   II: 6705196-6705272 Caenorhabditis elegans
Exon54146   94   II: 6705404-6705497 Caenorhabditis elegans
Exon54148   100   II: 6705544-6705643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H9.7.1 6702233 6705643 -1

1 Sequence

Length
2215

1 Sequence Ontology Term

Identifier Name Description
transcript