WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41G3.3b.1 Sequence Name  F41G3.3b.1
Length (nt)  2676   Chromosome Location  II: 6756590-6760585
Chromosome . Primary Identifier  II Chromosome Location . Start  6756590
Chromosome Location . End  6760585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018300 F41G3.3 F41G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41G3.3b F41G3.3b 2403   II: 6756590-6756713

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41G3.3b.1 6756590 6760585 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54308   124   II: 6756590-6756713 Caenorhabditis elegans
Exon54310   294   II: 6757039-6757332 Caenorhabditis elegans
Exon54312   270   II: 6757375-6757644 Caenorhabditis elegans
Exon54314   223   II: 6757839-6758061 Caenorhabditis elegans
Exon54316   646   II: 6758162-6758807 Caenorhabditis elegans
Exon54317   39   II: 6758859-6758897 Caenorhabditis elegans
Exon54319   14   II: 6759290-6759303 Caenorhabditis elegans
Exon54320   154   II: 6759305-6759458 Caenorhabditis elegans
Exon54321   340   II: 6759507-6759846 Caenorhabditis elegans
Exon54322   130   II: 6759912-6760041 Caenorhabditis elegans
Exon54323   90   II: 6760090-6760179 Caenorhabditis elegans
Exon54324   352   II: 6760234-6760585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41G3.3b.1 6756590 6760585 1

1 Sequence

Length
2676

1 Sequence Ontology Term

Identifier Name Description
transcript