WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41G3.12.1 Sequence Name  F41G3.12.1
Length (nt)  4804   Chromosome Location  II: 6760674-6775176
Chromosome . Primary Identifier  II Chromosome Location . Start  6760674
Chromosome Location . End  6775176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G3.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018304 agr-1 F41G3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41G3.12 F41G3.12 4422   II: 6760844-6761105

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41G3.12.1 6760674 6775176 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54325   432   II: 6760674-6761105 Caenorhabditis elegans
Exon54326   181   II: 6761649-6761829 Caenorhabditis elegans
Exon54327   59   II: 6762157-6762215 Caenorhabditis elegans
Exon54328   67   II: 6762335-6762401 Caenorhabditis elegans
Exon54329   121   II: 6763683-6763803 Caenorhabditis elegans
Exon54332   268   II: 6767287-6767554 Caenorhabditis elegans
Exon54333   118   II: 6767604-6767721 Caenorhabditis elegans
Exon54334   129   II: 6767767-6767895 Caenorhabditis elegans
Exon54335   202   II: 6767942-6768143 Caenorhabditis elegans
Exon54336   58   II: 6768194-6768251 Caenorhabditis elegans
Exon54339   101   II: 6768819-6768919 Caenorhabditis elegans
Exon54340   92   II: 6768970-6769061 Caenorhabditis elegans
Exon54341   106   II: 6769112-6769217 Caenorhabditis elegans
Exon54342   95   II: 6769260-6769354 Caenorhabditis elegans
Exon54343   233   II: 6769618-6769850 Caenorhabditis elegans
Exon54344   166   II: 6769897-6770062 Caenorhabditis elegans
Exon54345   159   II: 6770108-6770266 Caenorhabditis elegans
Exon54346   109   II: 6770676-6770784 Caenorhabditis elegans
Exon54347   119   II: 6770834-6770952 Caenorhabditis elegans
Exon54348   228   II: 6771088-6771315 Caenorhabditis elegans
Exon54349   213   II: 6771363-6771575 Caenorhabditis elegans
Exon54350   91   II: 6771622-6771712 Caenorhabditis elegans
Exon54351   211   II: 6771762-6771972 Caenorhabditis elegans
Exon54352   130   II: 6772019-6772148 Caenorhabditis elegans
Exon54353   243   II: 6772204-6772446 Caenorhabditis elegans
Exon54354   210   II: 6774139-6774348 Caenorhabditis elegans
Exon54355   172   II: 6774425-6774596 Caenorhabditis elegans
Exon54356   93   II: 6774640-6774732 Caenorhabditis elegans
Exon54357   398   II: 6774779-6775176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41G3.12.1 6760674 6775176 -1

1 Sequence

Length
4804

1 Sequence Ontology Term

Identifier Name Description
transcript