WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C2.6b.1 Sequence Name  T13C2.6b.1
Length (nt)  3350   Chromosome Location  II: 6783427-6788268
Chromosome . Primary Identifier  II Chromosome Location . Start  6783427
Chromosome Location . End  6788268 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C2.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020481 gldi-2 T13C2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C2.6b T13C2.6b 2736   II: 6783469-6783559

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C2.6b.1 6783427 6788268 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54374   133   II: 6783427-6783559 Caenorhabditis elegans
Exon54377   114   II: 6783709-6783822 Caenorhabditis elegans
Exon54378   150   II: 6783868-6784017 Caenorhabditis elegans
Exon54381   166   II: 6784071-6784236 Caenorhabditis elegans
Exon54384   142   II: 6784334-6784475 Caenorhabditis elegans
Exon54386   117   II: 6784858-6784974 Caenorhabditis elegans
Exon54388   268   II: 6785132-6785399 Caenorhabditis elegans
Exon54390   138   II: 6785449-6785586 Caenorhabditis elegans
Exon54392   111   II: 6785636-6785746 Caenorhabditis elegans
Exon54394   284   II: 6785920-6786203 Caenorhabditis elegans
Exon54396   612   II: 6786287-6786898 Caenorhabditis elegans
Exon54398   244   II: 6787105-6787348 Caenorhabditis elegans
Exon54403   871   II: 6787398-6788268 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C2.6b.1 6783427 6788268 1

1 Sequence

Length
3350

1 Sequence Ontology Term

Identifier Name Description
transcript