WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C2.6a.1 Sequence Name  T13C2.6a.1
Length (nt)  3346   Chromosome Location  II: 6783427-6788270
Chromosome . Primary Identifier  II Chromosome Location . Start  6783427
Chromosome Location . End  6788270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C2.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020481 gldi-2 T13C2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C2.6a T13C2.6a 2730   II: 6783469-6783559

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C2.6a.1 6783427 6788270 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54375   133   II: 6783427-6783559 Caenorhabditis elegans
Exon54376   114   II: 6783709-6783822 Caenorhabditis elegans
Exon54379   144   II: 6783874-6784017 Caenorhabditis elegans
Exon54380   166   II: 6784071-6784236 Caenorhabditis elegans
Exon54383   142   II: 6784334-6784475 Caenorhabditis elegans
Exon54385   117   II: 6784858-6784974 Caenorhabditis elegans
Exon54387   268   II: 6785132-6785399 Caenorhabditis elegans
Exon54389   138   II: 6785449-6785586 Caenorhabditis elegans
Exon54391   111   II: 6785636-6785746 Caenorhabditis elegans
Exon54393   284   II: 6785920-6786203 Caenorhabditis elegans
Exon54395   612   II: 6786287-6786898 Caenorhabditis elegans
Exon54397   244   II: 6787105-6787348 Caenorhabditis elegans
Exon54404   873   II: 6787398-6788270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C2.6a.1 6783427 6788270 1

1 Sequence

Length
3346

1 Sequence Ontology Term

Identifier Name Description
transcript