WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C2.3b.1 Sequence Name  T13C2.3b.1
Length (nt)  1597   Chromosome Location  II: 6789248-6791782
Chromosome . Primary Identifier  II Chromosome Location . Start  6789248
Chromosome Location . End  6791782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020479 T13C2.3 T13C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C2.3b T13C2.3b 1521   II: 6789283-6789375

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C2.3b.1 6789248 6791782 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54405   128   II: 6789248-6789375 Caenorhabditis elegans
Exon54407   213   II: 6789423-6789635 Caenorhabditis elegans
Exon54409   96   II: 6790128-6790223 Caenorhabditis elegans
Exon54410   106   II: 6790276-6790381 Caenorhabditis elegans
Exon54412   108   II: 6790429-6790536 Caenorhabditis elegans
Exon54414   80   II: 6790587-6790666 Caenorhabditis elegans
Exon54416   115   II: 6790716-6790830 Caenorhabditis elegans
Exon54418   111   II: 6790875-6790985 Caenorhabditis elegans
Exon54420   445   II: 6791048-6791492 Caenorhabditis elegans
Exon54423   195   II: 6791588-6791782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C2.3b.1 6789248 6791782 1

1 Sequence

Length
1597

1 Sequence Ontology Term

Identifier Name Description
transcript