WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04A2.7d.1 Sequence Name  C04A2.7d.1
Length (nt)  2607   Chromosome Location  II: 6854190-6858272
Chromosome . Primary Identifier  II Chromosome Location . Start  6854190
Chromosome Location . End  6858272 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001023 dnj-5 C04A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A2.7d C04A2.7d 2607   II: 6854190-6854265

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04A2.7d.1 6854190 6858272 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54749   76   II: 6854190-6854265 Caenorhabditis elegans
Exon54754   71   II: 6854968-6855038 Caenorhabditis elegans
Exon54758   102   II: 6855253-6855354 Caenorhabditis elegans
Exon54762   168   II: 6855403-6855570 Caenorhabditis elegans
Exon54766   117   II: 6855617-6855733 Caenorhabditis elegans
Exon54770   452   II: 6855785-6856236 Caenorhabditis elegans
Exon54774   183   II: 6856283-6856465 Caenorhabditis elegans
Exon54778   367   II: 6856509-6856875 Caenorhabditis elegans
Exon54782   236   II: 6856962-6857197 Caenorhabditis elegans
Exon54786   211   II: 6857250-6857460 Caenorhabditis elegans
Exon54790   147   II: 6857506-6857652 Caenorhabditis elegans
Exon54794   168   II: 6857702-6857869 Caenorhabditis elegans
Exon54798   203   II: 6857919-6858121 Caenorhabditis elegans
Exon54799   106   II: 6858167-6858272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04A2.7d.1 6854190 6858272 -1

1 Sequence

Length
2607

1 Sequence Ontology Term

Identifier Name Description
transcript