WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B7.3.1 Sequence Name  C44B7.3.1
Length (nt)  1977   Chromosome Location  II: 6860582-6863752
Chromosome . Primary Identifier  II Chromosome Location . Start  6860582
Chromosome Location . End  6863752 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016625 aff-1 C44B7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B7.3 C44B7.3 1770   II: 6860789-6860950

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.3.1 6860582 6863752 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54803   369   II: 6860582-6860950 Caenorhabditis elegans
Exon54804   91   II: 6860997-6861087 Caenorhabditis elegans
Exon54805   202   II: 6861157-6861358 Caenorhabditis elegans
Exon54806   79   II: 6861809-6861887 Caenorhabditis elegans
Exon54807   221   II: 6861936-6862156 Caenorhabditis elegans
Exon54808   100   II: 6862205-6862304 Caenorhabditis elegans
Exon54809   134   II: 6862360-6862493 Caenorhabditis elegans
Exon54810   121   II: 6862539-6862659 Caenorhabditis elegans
Exon54811   153   II: 6862709-6862861 Caenorhabditis elegans
Exon54812   203   II: 6862943-6863145 Caenorhabditis elegans
Exon54813   154   II: 6863193-6863346 Caenorhabditis elegans
Exon54814   150   II: 6863603-6863752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.3.1 6860582 6863752 -1

1 Sequence

Length
1977

1 Sequence Ontology Term

Identifier Name Description
transcript