WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B7.2b.1 Sequence Name  C44B7.2b.1
Length (nt)  1050   Chromosome Location  II: 6898751-6900770
Chromosome . Primary Identifier  II Chromosome Location . Start  6898751
Chromosome Location . End  6900770 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016624 hrpl-1 C44B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B7.2b C44B7.2b 1020   II: 6898751-6898779

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.2b.1 6898751 6900770 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54905   29   II: 6898751-6898779 Caenorhabditis elegans
Exon54908   97   II: 6898830-6898926 Caenorhabditis elegans
Exon54911   165   II: 6898972-6899136 Caenorhabditis elegans
Exon54914   303   II: 6899438-6899740 Caenorhabditis elegans
Exon54917   61   II: 6899790-6899850 Caenorhabditis elegans
Exon54923   203   II: 6900325-6900527 Caenorhabditis elegans
Exon54926   192   II: 6900579-6900770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.2b.1 6898751 6900770 1

1 Sequence

Length
1050

1 Sequence Ontology Term

Identifier Name Description
transcript