WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0252.3b.1 Sequence Name  B0252.3b.1
Length (nt)  1455   Chromosome Location  II: 6903014-6907757
Chromosome . Primary Identifier  II Chromosome Location . Start  6903014
Chromosome Location . End  6907757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0252.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015088 B0252.3 B0252.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0252.3b B0252.3b 1455   II: 6903014-6903187

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0252.3b.1 6903014 6907757 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54943   174   II: 6903014-6903187 Caenorhabditis elegans
Exon54948   93   II: 6903243-6903335 Caenorhabditis elegans
Exon54954   295   II: 6903849-6904143 Caenorhabditis elegans
Exon54960   216   II: 6904204-6904419 Caenorhabditis elegans
Exon54964   200   II: 6904481-6904680 Caenorhabditis elegans
Exon54971   368   II: 6904971-6905338 Caenorhabditis elegans
Exon54974   73   II: 6907218-6907290 Caenorhabditis elegans
Exon54980   36   II: 6907722-6907757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0252.3b.1 6903014 6907757 -1

1 Sequence

Length
1455

1 Sequence Ontology Term

Identifier Name Description
transcript