WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0252.2.1 Sequence Name  B0252.2.1
Length (nt)  1790   Chromosome Location  II: 6910072-6912659
Chromosome . Primary Identifier  II Chromosome Location . Start  6910072
Chromosome Location . End  6912659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0252.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000211 asm-1 B0252.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0252.2 B0252.2 1695   II: 6910084-6910153

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0252.2.1 6910072 6912659 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54988   82   II: 6910072-6910153 Caenorhabditis elegans
Exon54989   85   II: 6910205-6910289 Caenorhabditis elegans
Exon54990   118   II: 6910332-6910449 Caenorhabditis elegans
Exon54991   556   II: 6910636-6911191 Caenorhabditis elegans
Exon54992   127   II: 6911237-6911363 Caenorhabditis elegans
Exon54993   81   II: 6911600-6911680 Caenorhabditis elegans
Exon54994   171   II: 6911732-6911902 Caenorhabditis elegans
Exon54995   103   II: 6911951-6912053 Caenorhabditis elegans
Exon54996   87   II: 6912100-6912186 Caenorhabditis elegans
Exon54997   185   II: 6912233-6912417 Caenorhabditis elegans
Exon54998   195   II: 6912465-6912659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0252.2.1 6910072 6912659 1

1 Sequence

Length
1790

1 Sequence Ontology Term

Identifier Name Description
transcript