WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D3.2j.1 Sequence Name  F22D3.2j.1
Length (nt)  2930   Chromosome Location  II: 6928763-6947900
Chromosome . Primary Identifier  II Chromosome Location . Start  6928763
Chromosome Location . End  6947900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.2j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017699 flcn-1 F22D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D3.2j F22D3.2j 1872   II: 6929313-6929406

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2j.1 6928763 6947900 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55037   97   II: 6928763-6928859 Caenorhabditis elegans
Exon55044   101   II: 6929306-6929406 Caenorhabditis elegans
Exon55050   80   II: 6930627-6930706 Caenorhabditis elegans
Exon55055   104   II: 6930757-6930860 Caenorhabditis elegans
Exon55060   85   II: 6930915-6930999 Caenorhabditis elegans
Exon55065   178   II: 6931615-6931792 Caenorhabditis elegans
Exon55070   67   II: 6932212-6932278 Caenorhabditis elegans
Exon55075   75   II: 6932327-6932401 Caenorhabditis elegans
Exon55080   133   II: 6932447-6932579 Caenorhabditis elegans
Exon55085   123   II: 6933014-6933136 Caenorhabditis elegans
Exon55090   71   II: 6934085-6934155 Caenorhabditis elegans
Exon55098   82   II: 6940749-6940830 Caenorhabditis elegans
Exon55102   66   II: 6942712-6942777 Caenorhabditis elegans
Exon55110   123   II: 6944726-6944848 Caenorhabditis elegans
Exon55120   122   II: 6946129-6946250 Caenorhabditis elegans
Exon55126   367   II: 6946431-6946797 Caenorhabditis elegans
Exon55132   1056   II: 6946845-6947900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2j.1 6928763 6947900 1

1 Sequence

Length
2930

1 Sequence Ontology Term

Identifier Name Description
transcript