WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D3.2e.1 Sequence Name  F22D3.2e.1
Length (nt)  2909   Chromosome Location  II: 6928770-6947898
Chromosome . Primary Identifier  II Chromosome Location . Start  6928770
Chromosome Location . End  6947898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017699 flcn-1 F22D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D3.2e F22D3.2e 1860   II: 6929313-6929406

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2e.1 6928770 6947898 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55039   90   II: 6928770-6928859 Caenorhabditis elegans
Exon55042   101   II: 6929306-6929406 Caenorhabditis elegans
Exon55047   80   II: 6930627-6930706 Caenorhabditis elegans
Exon55052   104   II: 6930757-6930860 Caenorhabditis elegans
Exon55057   85   II: 6930915-6930999 Caenorhabditis elegans
Exon55062   178   II: 6931615-6931792 Caenorhabditis elegans
Exon55069   67   II: 6932212-6932278 Caenorhabditis elegans
Exon55072   75   II: 6932327-6932401 Caenorhabditis elegans
Exon55077   133   II: 6932447-6932579 Caenorhabditis elegans
Exon55082   123   II: 6933014-6933136 Caenorhabditis elegans
Exon55087   71   II: 6934085-6934155 Caenorhabditis elegans
Exon55096   82   II: 6940749-6940830 Caenorhabditis elegans
Exon55100   66   II: 6942712-6942777 Caenorhabditis elegans
Exon55113   111   II: 6944738-6944848 Caenorhabditis elegans
Exon55117   122   II: 6946129-6946250 Caenorhabditis elegans
Exon55123   367   II: 6946431-6946797 Caenorhabditis elegans
Exon55130   1054   II: 6946845-6947898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2e.1 6928770 6947898 1

1 Sequence

Length
2909

1 Sequence Ontology Term

Identifier Name Description
transcript