WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D3.2f.1 Sequence Name  F22D3.2f.1
Length (nt)  1107   Chromosome Location  II: 6929313-6936240
Chromosome . Primary Identifier  II Chromosome Location . Start  6929313
Chromosome Location . End  6936240 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017699 flcn-1 F22D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D3.2f F22D3.2f 1107   II: 6929313-6929406

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2f.1 6929313 6936240 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55045   94   II: 6929313-6929406 Caenorhabditis elegans
Exon55048   80   II: 6930627-6930706 Caenorhabditis elegans
Exon55053   104   II: 6930757-6930860 Caenorhabditis elegans
Exon55058   85   II: 6930915-6930999 Caenorhabditis elegans
Exon55063   178   II: 6931615-6931792 Caenorhabditis elegans
Exon55067   76   II: 6932203-6932278 Caenorhabditis elegans
Exon55073   75   II: 6932327-6932401 Caenorhabditis elegans
Exon55078   133   II: 6932447-6932579 Caenorhabditis elegans
Exon55083   123   II: 6933014-6933136 Caenorhabditis elegans
Exon55088   71   II: 6934085-6934155 Caenorhabditis elegans
Exon55091   88   II: 6936153-6936240 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2f.1 6929313 6936240 1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
transcript