WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D3.2c.1 Sequence Name  F22D3.2c.1
Length (nt)  1904   Chromosome Location  II: 6944305-6947897
Chromosome . Primary Identifier  II Chromosome Location . Start  6944305
Chromosome Location . End  6947897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017699 flcn-1 F22D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D3.2c F22D3.2c 897   II: 6944361-6944555

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2c.1 6944305 6947897 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55107   251   II: 6944305-6944555 Caenorhabditis elegans
Exon55111   111   II: 6944738-6944848 Caenorhabditis elegans
Exon55115   122   II: 6946129-6946250 Caenorhabditis elegans
Exon55121   367   II: 6946431-6946797 Caenorhabditis elegans
Exon55129   1053   II: 6946845-6947897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.2c.1 6944305 6947897 1

1 Sequence

Length
1904

1 Sequence Ontology Term

Identifier Name Description
transcript