WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15F1.5a.1 Sequence Name  C15F1.5a.1
Length (nt)  1258   Chromosome Location  II: 6967900-6970615
Chromosome . Primary Identifier  II Chromosome Location . Start  6967900
Chromosome Location . End  6970615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15F1.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015796 C15F1.5 C15F1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15F1.5a C15F1.5a 1146   II: 6967982-6968038

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15F1.5a.1 6967900 6970615 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55393   139   II: 6967900-6968038 Caenorhabditis elegans
Exon55395   99   II: 6968088-6968186 Caenorhabditis elegans
Exon55397   117   II: 6968231-6968347 Caenorhabditis elegans
Exon55403   54   II: 6968707-6968760 Caenorhabditis elegans
Exon55405   294   II: 6969194-6969487 Caenorhabditis elegans
Exon55407   111   II: 6969533-6969643 Caenorhabditis elegans
Exon55409   127   II: 6969691-6969817 Caenorhabditis elegans
Exon55412   101   II: 6969867-6969967 Caenorhabditis elegans
Exon55413   129   II: 6970353-6970481 Caenorhabditis elegans
Exon55414   87   II: 6970529-6970615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15F1.5a.1 6967900 6970615 -1

1 Sequence

Length
1258

1 Sequence Ontology Term

Identifier Name Description
transcript