WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15F1.2.1 Sequence Name  C15F1.2.1
Length (nt)  2636   Chromosome Location  II: 6979953-6988623
Chromosome . Primary Identifier  II Chromosome Location . Start  6979953
Chromosome Location . End  6988623 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15F1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015795 C15F1.2 C15F1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15F1.2 C15F1.2 2406   II: 6980006-6980065

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15F1.2.1 6979953 6988623 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55441   113   II: 6979953-6980065 Caenorhabditis elegans
Exon55442   183   II: 6980214-6980396 Caenorhabditis elegans
Exon55443   81   II: 6980452-6980532 Caenorhabditis elegans
Exon55444   149   II: 6980687-6980835 Caenorhabditis elegans
Exon55445   874   II: 6985921-6986794 Caenorhabditis elegans
Exon55446   217   II: 6986840-6987056 Caenorhabditis elegans
Exon55447   158   II: 6987136-6987293 Caenorhabditis elegans
Exon55448   153   II: 6987343-6987495 Caenorhabditis elegans
Exon55449   114   II: 6987752-6987865 Caenorhabditis elegans
Exon55450   179   II: 6987919-6988097 Caenorhabditis elegans
Exon55451   115   II: 6988145-6988259 Caenorhabditis elegans
Exon55452   300   II: 6988324-6988623 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15F1.2.1 6979953 6988623 1

1 Sequence

Length
2636

1 Sequence Ontology Term

Identifier Name Description
transcript