WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C52E12.3 Sequence Name  C52E12.3
Length (nt)  990   Chromosome Location  II: 7011077-7011191
Chromosome . Primary Identifier  II Chromosome Location . Start  7011077
Chromosome Location . End  7011191
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E12.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04263 SQV-7 36.9 329 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043033
WBRNAi00012312
WBRNAi00030083
WBRNAi00061537

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C52E12.3 7011077 7011191 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005025 sqv-7 C52E12.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C52E12.3 7011077 7011191 -1
CDS:C52E12.3 7011241 7011569 -1
CDS:C52E12.3 7011954 7012125 -1
CDS:C52E12.3 7012178 7012249 -1
CDS:C52E12.3 7012294 7012482 -1
CDS:C52E12.3 7012578 7012690 -1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C52E12.3.2 C52E12.3.2 1254   II: 7010798-7012692
Transcript:C52E12.3.1 C52E12.3.1 1256   II: 7010811-7012690