WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10E7.8a.1 Sequence Name  F10E7.8a.1
Length (nt)  3276   Chromosome Location  II: 7101221-7105034
Chromosome . Primary Identifier  II Chromosome Location . Start  7101221
Chromosome Location . End  7105034 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10E7.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017349 farl-11 F10E7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10E7.8a F10E7.8a 2931   II: 7101533-7101759

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10E7.8a.1 7101221 7105034 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55827   539   II: 7101221-7101759 Caenorhabditis elegans
Exon55830   462   II: 7101809-7102270 Caenorhabditis elegans
Exon55832   85   II: 7102318-7102402 Caenorhabditis elegans
Exon55834   1476   II: 7102618-7104093 Caenorhabditis elegans
Exon55836   180   II: 7104143-7104322 Caenorhabditis elegans
Exon55838   150   II: 7104369-7104518 Caenorhabditis elegans
Exon55840   147   II: 7104563-7104709 Caenorhabditis elegans
Exon55842   173   II: 7104752-7104924 Caenorhabditis elegans
Exon55844   64   II: 7104971-7105034 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10E7.8a.1 7101221 7105034 -1

1 Sequence

Length
3276

1 Sequence Ontology Term

Identifier Name Description
transcript