WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F8.2.1 Sequence Name  T07F8.2.1
Length (nt)  1369   Chromosome Location  II: 7144607-7147383
Chromosome . Primary Identifier  II Chromosome Location . Start  7144607
Chromosome Location . End  7147383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020319 npr-31 T07F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F8.2 T07F8.2 1227   II: 7144619-7144725

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F8.2.1 7144607 7147383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55971   119   II: 7144607-7144725 Caenorhabditis elegans
Exon55972   134   II: 7144774-7144907 Caenorhabditis elegans
Exon55973   390   II: 7144961-7145350 Caenorhabditis elegans
Exon55974   128   II: 7145767-7145894 Caenorhabditis elegans
Exon55975   74   II: 7146118-7146191 Caenorhabditis elegans
Exon55976   108   II: 7146240-7146347 Caenorhabditis elegans
Exon55977   416   II: 7146968-7147383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F8.2.1 7144607 7147383 1

1 Sequence

Length
1369

1 Sequence Ontology Term

Identifier Name Description
transcript